CDS

Accession Number TCMCG007C59210
gbkey CDS
Protein Id XP_009118215.1
Location complement(join(42935246..42935303,42935396..42935548,42935680..42935747,42935830..42935931,42936023..42936094,42936223..42936271,42936356..42936489,42936809..42936875,42936960..42937063,42937144..42937260,42937421..42937500,42937596..42937605))
Gene LOC103843266
GeneID 103843266
Organism Brassica rapa

Protein

Length 337aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009119967.3
Definition eukaryotic translation initiation factor 3 subunit H [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category J
Description component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K03247        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko05162        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map05162        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0005844        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006446        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009744        [VIEW IN EMBL-EBI]
GO:0009746        [VIEW IN EMBL-EBI]
GO:0009749        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034284        [VIEW IN EMBL-EBI]
GO:0034285        [VIEW IN EMBL-EBI]
GO:0034286        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042788        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045948        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACCATGGCTAGGTCGTTTTTGCAGGCGATATCAAAGGACGAGGCGGTGGCTCCTCCTCTCAGAGTTGTTCAGATCGAAGGACTGGCTGTGCTAAAGATAATCAAGCACTGTAAGGAGTTTGCACCGACGCTTGTCACAGGGCAGCTTCTTGGACTTGATGTTGGTAGTGTTCTTGAAGTCACCAATTGTTTTCCTTTCCCTGTGAGAGATGACGATGAAGAGATTGAAGCTGATGGGGCTAATTATCAGCTTGAGATGATGAGGTGTCTGAGGGAGGTTAATGTTGACAACAACACTGTTGGCTGGTATCAATCCACTGTTCTTGGGTCTTATCAGACTGTAGAACTCATTGAGACCTTCATGAATTACCAGGAGAACATCAAGAGGTGTGTTTGCATCATCTATGATCCCTCTAAAGCTGACCTAGGCGTCTTAGCTTTGAAGGCTTTGAAGCTTTCAGATTCCTTTATGGAGTTGTACCGCGCTGGAAACTTTACAGGGGAGAAGTTGAGAGAGAAAAACTTCTCCTGGATGGATATTTTCGAGGAGATTCCTATCAAGGTCTCAAACTCTGCGCTTGTCAGTGCCTTCATGACCGAACTGGAGACTGATGCACCTGTGTCACAGGGTGATTACGATCGTCTGCAGTCATCAACCACTCCTTTCCTCGAGAACAATATGGAATTTCTGATTAAATGCATGGATGATTTATCTATGGAACAGCAAAAGTTCCAATACTACTACCGGAACCTGTCTCGCCAGCAAGCGCAGCAGCAAGCCTGGCTCCAGAAGAGGAGGACGGAGAATATGGCTCGTCGATCAGCTGGGGAAGAGCCTTTGCCCGAGGAGGATCCATCAAACCCAATCTTTAAGCCGATCCCTGAACCATCAAGGCTAGAGAGCTTCCTCATCACAAACCAAGTCTCAAACTTTTGCGGCCAAATCAATGGAGTGGCTGGCCAGAACTTCAGCAGGCTCTACCTGACCAAGGCGTTGCACGAGAACTGA
Protein:  
MATMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFAPTLVTGQLLGLDVGSVLEVTNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRAGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSAFMTELETDAPVSQGDYDRLQSSTTPFLENNMEFLIKCMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKRRTENMARRSAGEEPLPEEDPSNPIFKPIPEPSRLESFLITNQVSNFCGQINGVAGQNFSRLYLTKALHEN